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Description

This training provided hands-on experiences on the use of hyperspectral in-situ field spectroradiometers for land and water targets as well as a first-view of some of the hyperspectral imagery collected during the BioSCape campaign. Participants used in-situ spectral data as means for validation of airborne imagery. 

We also explored aspects for consideration when working with airborne data such as sun glint, sun angle, aircraft (pitch, row, yaw) factors, among others and how these impact the image analysis. Participants explored differences between in-situ and image spectral signatures and how these differences are affected by image spatial resolution.

Dates

Oct. 7-8, 2024

Location

Cape Town, South Africa

Host

NASA ARSET

ARSET Instructors

Justin Fain, Sativa Cruz, Juan Torres-Pérez

Earthdata: BioSCape Data Skills Workshop: From the Field to the Image

Description

This workshop equipped participants with the skills to find, subset, and visualize the various BioSCape field and airborne (imaging spectroscopy and full-waveform LiDAR) data sets as well as corresponding NASA Earthdata satellite datasets. 

Participants learned data skills through worked examples in terrestrial and aquatic ecosystems, including: wrangling LiDAR data, performing band math calculations, calculating spectral diversity metrics, machine learning and image classification, and mapping functional traits. The workshop format was a mix of expert talks and interactive coding notebooks and was be run through the BioSCape cloud computing environment.

Dates

Oct. 9-11, 2024

Location

Cape Town, South Africa

Host

NASA’s Oak Ridge National Laboratory Distributed Active Archive Center (ORNL DAAC), in close collaboration with:

  • BioSCape,
  • the South African Environmental Observation Network (SAEON),
  • the University of Wisconsin Madison (Phil Townsend),
  • The Nature Conservancy (Glenn Moncrieff),
  • the University of California Merced (Erin Hestir),
  • the University of Cape Town (Jasper Slingsby),
  • Jet Propulsion Laboratory (Kerry Cawse-Nicholson), and
  • UNESCO.

Instructors

  • In-Person Contributors: Anabelle Cardoso, Erin Hestir, Phil Townsend, Henry Frye, Glenn Moncrieff, Jasper Slingsby, Michele Thornton, Rupesh Shrestha
  • Virtual Contributors: Kerry Cawse-Nicholson, Nico Stork, Kyle Kovach
  • Cloud Computing Support: Alexey Shiklomanov & Evan Lang (NASA Goddard Space Flight Centre) and Amazon Web Services.

Audience

  • This workshop is primarily intended for government natural resource management agency representatives and field technicians in South Africa, as well as local academics and students, especially those connected to the BioSCape Team.

Course Format

  • Five-day, in-person workshop

Sessions

Day 1: Introduction to Optical Data and Field Spectroscopy

Monday, Oct. 7, 2024
TimeTopicInstructorMaterials
8:30-9:00amOnsite Registration, Coffee, Tea, and Rusks  
9:00-9:30amIntroduction of ARSET, BioSCape, and ORNL Teams and Participants  
9:30-10:00amThe NASA ARSET Program – OverviewSativa CruzDay 1, Part 1 Presentation Slides (PDF, 1.9MB)
10:00-10:30amNASA Optical Sensors – Satellite and AirborneSativa CruzDay 1, Part 2 Presentation Slides (PDF, 2.7MB)
10:30-10:45amBreak  
10:45-11:30amBasic Principles of Field Spectroscopy and Best Practices for Aquatic Target Data CollectionJuan Torres-PérezDay 1, Part 3 Presentation Slides (PDF, 3.4MB)
11:30am-12:00pmThe SpectraVista HR-512i SpectroradiometerJuan Torres-Pérez 
12:00-12:15pmGroup Photo  
12:15-1:30pmLunch  
1:30-2:30pmManaging HR-512i Data: The Good Old Fashioned WayJuan Torres-Pérez 
2:30-2:45pmBreak  
2:45-4:00pmManaging HR-512i Data: The Coding WayJustin Fain 
4:00-4:30pmA Quick Look at Some of the CyanoSCape's DatasetsJuan Torres-Pérez 
4:30-4:45pmSummary of Day 1; Agenda of Day 2Juan Torres-Pérez, Sativa Cruz, Justin Fain 

Day 2: Field Data Collection and Processing

Tuesday, Oct. 8, 2024
TimeTopicInstructor
9:00-9:15amDay 2 AgendaSativa Cruz
9:15-10:30amAcquisition of Field Spectra at a Local Water BodyJuan Torres-Pérez, Sativa Cruz, Justin Fain
10:30-10:45amBreak 
10:45-11:30amData DownloadingJuan Torres-Pérez
11:30am-12:00pmQuick Look at DatasetsJuan Torres-Pérez
12:00-1:30pmLunch 
1:30-3:00pmPractical Exercise with Day's DatasetsJuan Torres-Pérez, Sativa Cruz, Justin Fain
3:00-3:15pmBreak 
3:15-4:00pmDiscussion of Data Spectral Curves 
4:00-4:15pmSummary of Field Spectroscopy Workshop 
4:15-4:30pmHomework and Survey 
4:30-4:45pmConclusion of Field Spectroscopy WorkshopJuan Torres-Pérez, Sativa Cruz, Justin Fain

Day 3: BioSCape Data Skills Workshop

Wednesday, Oct. 9, 2024
TimeTopicInstructor
7:45-8:00amCoffee 
8:00-8:05amWelcomeAnabelle Cardoso
8:05-8:35amBioSCape OverviewAnabelle Cardoso
8:35-8:45amNASA EarthdataMichele Thornton
8:45-9:05amEarthdata SearchMichele Thornton, Rupesh Shrestha
9:05-9:20amBioSCape CloudMichele Thornton
9:20-10:10amJupyterHub Basics 
10:10-10:40amBreak 
10:40-10:55amBioSCape Field DataAnabelle Cardoso
10:55-11:20amBioSCape Airborne DataAnabelle Cardoso
11:20-11:50amHighly Dimensional Imaging Spectroscopy DataGlenn Moncrieff
11:50am-12:10pmOpen Q&A 
12:10-1:25pmLunch 
1:25-2:25pmAVIRIS-NG and Field DataMichele Thornton, Rupesh Shrestha
2:25-2:40pmPRISM DataMichele Thornton, Rupesh Shrestha
2:40-3:10pmBreak 
3:10-3:25pmPost-Fire Vegetation Growth with LVIS and GEDIJasper Slingsby
3:25-4:25pmLVIS DataRupesh Shrestha
4:25-5:00pmOpen Discussion 

Day 4: BioSCape Data Skills Workshop

Thursday, Oct. 10, 2024
TimeTopicInstructor
7:45-8:00amCoffee 
8:00-8:15amHyTES and ECOSTRESS Thermal InfraRed (TIR) Data 
8:15-9:15amHyTES DataMichele Thornton
9:15-10:30amOcean Color with PRISM and PACEErin Hestir
10:30-11:00amBreak 
11:00-11:20amSpectral DiversityHenry Frye
11:20am-12:20pmSpectral Diversity with AVIRIS-NGPhil Townsend, Henry Frye
12:20-1:35pmLunch 
1:35-2:55pmMapping Aliens with Machine Learning and AVIRIS-NGGlenn Moncrieff
2:55-5:00pmOpen Discussion 

Day 5: BioSCape Data Skills Workshop

Friday, Oct. 11, 2024
TimeTopicInstructor
7:45-8:00amCoffee 
8:00-9:30amSpectroscopy for Plant TraitsPhil Townsend
9:30-9:50amBreak 
9:50-10:10amFunctional Trait DataPhil Townsend
10:10-11:10amFunctional Trait MappingPhil Townsend
11:10-11:40amOpen Discussion 
11:40am-12:00pmFeedback 
12:00-1:00pmLunch 

Citation

(2024). ARSET - Field Spectroscopy Hands-On Training for Airborne Image Validation EARTHDATA - BioSCape Data Skills Workshop: From the Field to the Image. NASA Applied Remote Sensing Training Program (ARSET). https://www.earthdata.nasa.gov/learn/trainings/arset-field-spectroscopy-hands-training-airborne-image-validation-earthdata

Details

Last Updated

June 25, 2025

Published

June 17, 2025

Data Center/Project

Applied Remote Sensing Training Program (ARSET)